Transition from SOG/PISCES to SMELT
The biological model dynamics are adapted from the 1-d SOG model with some modifications for the 3-d domain, as described in the following sections.
Differences in Mesozooplankton Closure implementation
It was necessary to adapt the implementation of the mesozooplankton closure term to three dimensions. In SMELT, the seasonally-varying mesozooplankton population is distributed in three dimensions so that its abundance is proportional to its food source.
Parameter definitions
Parameter names have been adapted as described in the tables linked below.